# Circos: Alignments to links

**Galaxy Tool ID**: `toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_aln_to_links/0.69.8+galaxy10`
**Version**: 0.69.8+galaxy10
**Category**: Graph/Display Data

> reformats alignment files to prepare for Circos

**EDAM Topics**: topic_0797, topic_0092

**EDAM Operations**: operation_1812

## Example Query

> "Run Circos: Alignments to links on my data"

## Run via Galaxy Bridge

```bash
python galaxy_bridge.py --tool-details toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_aln_to_links/0.69.8+galaxy10
python galaxy_bridge.py --run toolshed.g2.bx.psu.edu/repos/iuc/circos/circos_aln_to_links/0.69.8+galaxy10 --input <file> --output <dir>
```

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*Auto-generated from usegalaxy.org tool index*
