# BAM filter

**Galaxy Tool ID**: `toolshed.g2.bx.psu.edu/repos/iuc/ngsutils_bam_filter/ngsutils_bam_filter/0.5.7.1`
**Version**: 0.5.7.1
**Category**: ChIP-seq

> Removes reads from a BAM file based on criteria

## Example Query

> "Run BAM filter on my data"

## Run via Galaxy Bridge

```bash
python galaxy_bridge.py --tool-details toolshed.g2.bx.psu.edu/repos/iuc/ngsutils_bam_filter/ngsutils_bam_filter/0.5.7.1
python galaxy_bridge.py --run toolshed.g2.bx.psu.edu/repos/iuc/ngsutils_bam_filter/ngsutils_bam_filter/0.5.7.1 --input <file> --output <dir>
```

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*Auto-generated from usegalaxy.org tool index*
