# Report: Applications of LLM-Based Agents in Biology and Medicine

This report compiles a selection of scholarly articles focusing on the utilization of large language models (LLMs) in the fields of biology and medicine.

## Relevant Papers

1. **Title:** Large language models in medicine  
   **Authors:** Arun James Thirunavukarasu, Darren Shu Jeng Ting, Kabilan Elangovan, Laura Gutierrez, Ting Fang Tan, Daniel Shu Wei Ting  
   **Journal:** Nature Medicine  
   **Publication Date:** 17 July 2023  
   **Abstract:** Explores the use of LLMs in healthcare, how they are developed, deployed, and their strengths and weaknesses in clinical settings.  
   [Read More](https://www.nature.com/articles/s41591-023-02448-8)

2. **Title:** The application of large language models in medicine: A scoping review  
   **Authors:** Xiangbin Meng, et al.  
   **Journal:** iScience  
   **Publication Date:** 17 May 2024  
   **Abstract:** Reviews the role of LLMs like ChatGPT in medical settings, focusing on diagnostics, education, and communication enhancements.  
   [Read More](https://www.sciencedirect.com/science/article/pii/S2589004224009350)

3. **Title:** A Survey of Large Language Models in Medicine: Progress, Application, and Challenge  
   **Authors:** Hongjian Zhou, Fenglin Liu, et al.  
   **Journal:** arXiv  
   **Publication Date:** 22 Jul 2024  
   **Abstract:** Provides an overview of LLMs in medical applications, the challenges faced, and future prospects.  
   [Read More](https://arxiv.org/abs/2311.05112)

4. **Title:** The future landscape of large language models in medicine  
   **Authors:** Jan Clusmann, Fiona R. Kolbinger, et al.  
   **Journal:** Communications Medicine  
   **Publication Date:** 10 Oct 2023  
   **Abstract:** Discusses the potentials and risks of LLMs in medicine, focusing on patient care, research, and education.  
   [Read More](https://www.nature.com/articles/s43856-023-00370-1)

5. **Title:** AI for Advanced Biomedical Applications  
   **Journal:** BME Frontiers  
   **Publication Date:** 2022  
   **Abstract:** Overview of AI applications in biomedical science, including diagnostics and image analyses.  
   [Read More](https://spj.science.org/page/BMEF/si/AI-Advanced-Biomedical-Applications)

6. **Title:** MarkerGenie: an NLP-enabled text-mining system for biomedical entity relation extraction  
   **Authors:** Wenhao Gu, Xiao Yang, et al.  
   **Journal:** Bioinformatics Advances  
   **Publication Date:** 13 May 2022  
   **Abstract:** Presents a system using NLP for biomedical tasks, enhancing automated data extraction.  
   [Read More](https://academic.oup.com/bioinformaticsadvances/article/2/1/vbac035/6585385)

7. **Title:** Applying interpretable machine learning in computational biology — pitfalls, recommendations and opportunities for new developments  
   **Authors:** Valerie Chen, Muyu Yang, et al.  
   **Journal:** Nature Methods  
   **Publication Date:** 9 Aug 2024  
   **Abstract:** Discusses the application of interpretative machine learning methods in computational biology tasks.  
   [Read More](https://www.nature.com/articles/s41592-024-01645-8)