# Dependency Index

Generated: `2026-02-23T17:02:59Z`

## Summary

- R files: `22`
- Python files: `34`
- R file-level edges: `30`
- Python file-level edges: `37`
- R -> Python module edges: `1`

## Graph Files

- `r_file_graph.mmd`
- `python_file_graph.mmd`
- `key_function_edges.mmd`

## Top R Hubs

- `asa/R/workflow__run_task.R` (out: 5, in: 0)
- `asa/R/agent__initialize.R` (out: 4, in: 10)
- `asa/R/postprocess__extract_agent_results.R` (out: 4, in: 1)
- `asa/R/workflow__research_enumeration.R` (out: 4, in: 0)
- `asa/R/agent__run_engine.R` (out: 3, in: 0)
- `asa/R/public__s3_methods.R` (out: 2, in: 10)
- `asa/R/workflow__audit.R` (out: 2, in: 0)
- `asa/R/infra__runtime_config.R` (out: 2, in: 0)
- `asa/R/postprocess__process_outputs.R` (out: 1, in: 5)
- `asa/R/shared__helpers.R` (out: 1, in: 4)

## Top Python Hubs

- `asa/inst/python/asa_backend/graph/agent_graph_core.py` (out: 5, in: 3)
- `asa/inst/python/workflows/research_graph_workflow.py` (out: 5, in: 0)
- `asa/inst/python/asa_backend/search/__init__.py` (out: 4, in: 1)
- `asa/inst/python/tools/entity_wikidata_tool.py` (out: 3, in: 1)
- `asa/inst/python/tools/archive_wayback_tool.py` (out: 3, in: 1)
- `asa/inst/python/asa_backend/api/agent_api.py` (out: 3, in: 1)
- `asa/inst/python/shared/state_graph_utils.py` (out: 1, in: 6)
- `asa/inst/python/asa_backend/search/ddg_transport.py` (out: 1, in: 5)
- `asa/inst/python/shared/schema_outcome_gate.py` (out: 1, in: 2)
- `asa/inst/python/asa_backend/search/tor_config.py` (out: 1, in: 1)

## Machine-Readable Manifest

- `dependency_manifest.json`
- `r_manifest.json`
- `python_manifest.json`
